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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1939878_1940478_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1939878 - 1940478

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCCATTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TTTTGCTCCATT

Flanking Amino Acid:

QKNNMEITWTPLNATQAYGP

Intron Amino Acid Position:

762

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.2

37.4

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

65.2

0.34

1.1

69.1

36.4

Minor 5ss

38.8

-1.3

2.9

46.2

Minor BPS

49.6

0.05

2.4

79.83

42.7

Associated Gene:

Gene:

NFASC

Ensembl Gene ID:

ENSAPLG00000006326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034519

1921970 - 1959760

37791

ENSAPLT00000018914

1921970 - 1959760

37791

ENSAPLT00000006776

1921970 - 1959760

37791

ENSAPLT00000040390

1921970 - 1959760

37791

ENSAPLT00000039111

1921970 - 1959760

37791