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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1940702_1942308_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1940702 - 1942308

Intron Length:

1607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

CCCGACCGCCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TTGTCCCCGACC

Flanking Amino Acid:

DTVIGYSGEDYPKAAPTDVR

Intron Amino Acid Position:

836

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

81.7

31.1

Major BPS

66.3

0.4

1.1

41.8

Major PPT

55.9

0.13

45.5

36.2

Minor 5ss

38.8

-1.3

57.3

41.2

Minor BPS

54.4

0.12

1.9

71.17

40.3

Associated Gene:

Gene:

NFASC

Ensembl Gene ID:

ENSAPLG00000006326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039111

1921970 - 1959760

37791

ENSAPLT00000034519

1921970 - 1959760

37791

ENSAPLT00000018914

1921970 - 1959760

37791

ENSAPLT00000006776

1921970 - 1959760

37791

ENSAPLT00000040390

1921970 - 1959760

37791