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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1945631_1946259_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1945631 - 1946259

Intron Length:

629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTACGTGCC

5'SS Class:

major

3'SS Sequence:

CTTTCCTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAA

U12 Branch Point Sequence:

CCAAGCTGAAGC

Flanking Amino Acid:

LTGYNLRYQAFNGSKTGRTL

Intron Amino Acid Position:

984

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.2

59.7

40.7

Major BPS

58.2

0.2

1.1

49.1

Major PPT

81.1

0.7

73.3

31.6

Minor 5ss

35.8

-1.6

3.4

54.1

43.1

Minor BPS

40.9

-0.7

2.1

44.35

43.4

Associated Gene:

Gene:

NFASC

Ensembl Gene ID:

ENSAPLG00000006326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018914

1921970 - 1959760

37791

ENSAPLT00000006776

1921970 - 1959760

37791

ENSAPLT00000040390

1921970 - 1959760

37791

ENSAPLT00000039111

1921970 - 1959760

37791

ENSAPLT00000034519

1921970 - 1959760

37791