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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1946434_1948253_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1946434 - 1948253

Intron Length:

1820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGCACCCTGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

CCCTCTCTATCC

Flanking Amino Acid:

VEESPALLNEATPTPAATWL

Intron Amino Acid Position:

1042

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

76.8

31.8

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

58.6

0.19

1.1

33.4

Minor 5ss

39.1

-1.2

50.2

46.2

Minor BPS

46.4

-0.2

1.9

53.94

44.5

Associated Gene:

Gene:

NFASC

Ensembl Gene ID:

ENSAPLG00000006326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018914

1921970 - 1959760

37791

ENSAPLT00000006776

1921970 - 1959760

37791

ENSAPLT00000040390

1921970 - 1959760

37791

ENSAPLT00000034519

1921970 - 1959760

37791