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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1948269_1954887_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1948269 - 1954887

Intron Length:

6619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGTAC

5'SS Class:

major

3'SS Sequence:

TTCCCTCTGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

TTCTCCACAGCC

Flanking Amino Acid:

ALLNEATPTPAATWLPPTAV

Intron Amino Acid Position:

1047

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.2

61.1

40.6

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

74.9

0.56

0.9

37.1

Minor 5ss

41.5

-0.9

3.4

58.4

46.5

Minor BPS

49.1

-0

2.1

67.88

43.4

Associated Gene:

Gene:

NFASC

Ensembl Gene ID:

ENSAPLG00000006326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034519

1921970 - 1959760

37791

ENSAPLT00000018914

1921970 - 1959760

37791

ENSAPLT00000006776

1921970 - 1959760

37791

ENSAPLT00000040390

1921970 - 1959760

37791