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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1955104_1956939_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1955104 - 1956939

Intron Length:

1836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACTGAGC

5'SS Class:

weak_major

3'SS Sequence:

ACCTGTCCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TAATCCACAATA

Flanking Amino Acid:

APAATTKQELDTNGSSIWDI

Intron Amino Acid Position:

1119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.9

0.23

1.2

51.7

45.2

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

64.1

0.32

55.5

39.6

Minor 5ss

31.2

-2.2

3.3

34.6

41.3

Minor BPS

54.2

0.13

1.8

67.33

38.5

Associated Gene:

Gene:

NFASC

Ensembl Gene ID:

ENSAPLG00000006326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034519

1921970 - 1959760

37791

ENSAPLT00000018914

1921970 - 1959760

37791

ENSAPLT00000006776

1921970 - 1959760

37791

ENSAPLT00000039111

1921970 - 1959760

37791