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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1957057_1958470_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1957057 - 1958470

Intron Length:

1414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGCATC

5'SS Class:

major

3'SS Sequence:

TTCTGTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

CTGGGTTTGATG

Flanking Amino Acid:

GTDFVVKYITSNKTEKSIPV

Intron Amino Acid Position:

1158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

70.3

40.5

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

85.1

0.79

0.8

83.8

31.2

Minor 5ss

46.1

-0.4

2.9

66.8

Minor BPS

44.1

-0.6

1.9

44.68

Associated Gene:

Gene:

NFASC

Ensembl Gene ID:

ENSAPLG00000006326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039111

1921970 - 1959760

37791

ENSAPLT00000034519

1921970 - 1959760

37791

ENSAPLT00000018914

1921970 - 1959760

37791

ENSAPLT00000006776

1921970 - 1959760

37791