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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1993159_1993396_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1993159 - 1993396

Intron Length:

238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTCCC

5'SS Class:

major

3'SS Sequence:

TCTGCATGTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

GATCAAATAAAG

Flanking Amino Acid:

VSREASLRFGFLQEFSAEER

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

63.1

41.5

Major BPS

0.3

62.3

30.4

Major PPT

68.5

0.42

66.2

39.8

Minor 5ss

38.4

-1.3

56.1

40.8

Minor BPS

39.7

-0.9

44.52

39.6

Associated Gene:

Gene:

CNTN2

Ensembl Gene ID:

ENSAPLG00000005748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006057

1988578 - 2004696

16119