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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1993493_1993773_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1993493 - 1993773

Intron Length:

281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGGCAA

U12 Branch Point Sequence:

TGCTCCCCACAG

Flanking Amino Acid:

FACSPPPHYPGLSYRWLLNE

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

45.4

-0.2

1.4

52.7

43.2

Major PPT

71.7

0.49

0.8

64.9

30.8

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

40.5

-0.8

2.1

46.57

45.5

Associated Gene:

Gene:

CNTN2

Ensembl Gene ID:

ENSAPLG00000005748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006057

1988578 - 2004696

16119