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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1994669_1994911_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1994669 - 1994911

Intron Length:

243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTCCCGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAC

U12 Branch Point Sequence:

CTGGGCTTCACC

Flanking Amino Acid:

MVTLECFAFGNPVPRIKWRK

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

73.9

29.7

Major BPS

59.7

0.24

1.3

65.3

41.6

Major PPT

74.1

0.54

0.8

69.8

Minor 5ss

29.2

-2.4

3.1

32.8

35.7

Minor BPS

46.1

-0.3

2.3

57.14

47.8

Associated Gene:

Gene:

CNTN2

Ensembl Gene ID:

ENSAPLG00000005748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006057

1988578 - 2004696

16119