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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1996534_1997397_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1996534 - 1997397

Intron Length:

864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCCCGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CGTTCCTTAATC

Flanking Amino Acid:

VYASAELTVQALAPDFRLNP

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

83.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

71.1

0.48

0.7

66.1

22.9

Minor 5ss

42.9

-0.8

2.8

44.3

Minor BPS

79.9

0.92

1.1

79.01

36.6

Associated Gene:

Gene:

CNTN2

Ensembl Gene ID:

ENSAPLG00000005748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006057

1988578 - 2004696

16119