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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1997950_1998342_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1997950 - 1998342

Intron Length:

393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAGATG

5'SS Class:

major

3'SS Sequence:

TCTTTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

TTGCAGCTAACA

Flanking Amino Acid:

ANSTGILSVRDATKITLAPS

Intron Amino Acid Position:

502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

66.7

44.4

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

86.8

0.83

0.7

81.5

23.5

Minor 5ss

33.8

-1.8

3.6

47.3

48.3

Minor BPS

44.3

-0.4

2.4

62.76

42.9

Associated Gene:

Gene:

CNTN2

Ensembl Gene ID:

ENSAPLG00000005748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006057

1988578 - 2004696

16119