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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1998519_1998656_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1998519 - 1998656

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCCACGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

CTTTCCCCACCG

Flanking Amino Acid:

SEGHYRRASVKEAVGDLTIL

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.8

35.2

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

71.5

0.48

0.8

65.9

28.9

Minor 5ss

29.8

-2.3

2.6

30.5

37.5

Minor BPS

46.8

-0.3

2.2

60.27

47.1

Associated Gene:

Gene:

CNTN2

Ensembl Gene ID:

ENSAPLG00000005748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006057

1988578 - 2004696

16119