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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1999214_1999356_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1999214 - 1999356

Intron Length:

143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

TTGGATTATATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGGAT

U12 Branch Point Sequence:

TGTTATTGGATT

Flanking Amino Acid:

LSNKWKQMRTNPVNIEGNAE

Intron Amino Acid Position:

654

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

73.7

35.7

Major BPS

62.6

0.31

1.4

63.1

44.4

Major PPT

67.8

0.4

62.1

43.4

Minor 5ss

39.4

-1.2

3.3

58.2

40.5

Minor BPS

52.3

0.15

1.7

73.34

37.5

Associated Gene:

Gene:

CNTN2

Ensembl Gene ID:

ENSAPLG00000005748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006057

1988578 - 2004696

16119