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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1999507_2000237_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1999507 - 2000237

Intron Length:

731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGGGCCGTGACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACCCAA

U12 Branch Point Sequence:

TGGGCCGTGACA

Flanking Amino Acid:

PSSKIRTKEAAPTVAPSGLG

Intron Amino Acid Position:

704

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.2

34.9

Major BPS

55.3

0.13

1.2

64.7

33.6

Major PPT

56.1

0.14

1.1

49.4

43.9

Minor 5ss

31.9

-2.1

3.3

41.7

44.9

Minor BPS

-0

2.2

62.71

43.8

Associated Gene:

Gene:

CNTN2

Ensembl Gene ID:

ENSAPLG00000005748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006057

1988578 - 2004696

16119