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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2001275_2001594_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2001275 - 2001594

Intron Length:

320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCTCGAC

5'SS Class:

major

3'SS Sequence:

CTTTTCCATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CCTTACTGAACG

Flanking Amino Acid:

DMTGVLLGYEIRYWKDGDKE

Intron Amino Acid Position:

845

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.1

55.8

37.7

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

79.5

0.66

0.8

78.5

29.2

Minor 5ss

30.2

-2.3

3.4

40.8

45.8

Minor BPS

56.2

0.06

1.8

61.18

46.2

Associated Gene:

Gene:

CNTN2

Ensembl Gene ID:

ENSAPLG00000005748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006057

1988578 - 2004696

16119