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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2002597_2003128_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2002597 - 2003128

Intron Length:

532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTACGTACG

5'SS Class:

major

3'SS Sequence:

CCCTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTGCAA

U12 Branch Point Sequence:

TGCTCCTTCCCT

Flanking Amino Acid:

PAEVHILRNSGTSMMVEDSV

Intron Amino Acid Position:

1001

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

66.8

44.4

Major BPS

47.8

-0.1

1.3

57.3

39.4

Major PPT

85.7

0.8

0.7

83.6

24.7

Minor 5ss

35.5

-1.7

2.9

43.2

Minor BPS

44.7

-0.3

3.6

76.24

46.3

Associated Gene:

Gene:

CNTN2

Ensembl Gene ID:

ENSAPLG00000005748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006057

1988578 - 2004696

16119