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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2021616_2021897_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2021616 - 2021897

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

CTCTTGGTAACA

Flanking Amino Acid:

NIELQGVPNDEVHPLLGVKG

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.8

35.2

Major BPS

76.8

0.67

40.9

Major PPT

80.8

0.69

0.8

76.1

32.5

Minor 5ss

29.8

-2.3

2.6

30.5

37.5

Minor BPS

45.3

-0.3

2.6

61.69

45.2

Associated Gene:

Gene:

RBBP5

Ensembl Gene ID:

ENSAPLG00000005563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005810

2016651 - 2028246

11596