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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2023576_2024125_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2023576 - 2024125

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTGGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TCATCTTGAATT

Flanking Amino Acid:

VVSIWAQNQVENWSAFAPDF

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

83.5

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

67.5

0.39

1.1

62.3

43.8

Minor 5ss

45.5

-0.5

2.9

63.6

Minor BPS

66.8

0.6

1.4

77.41

39.4

Associated Gene:

Gene:

RBBP5

Ensembl Gene ID:

ENSAPLG00000005563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005810

2016651 - 2028246

11596