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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2024462_2024732_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2024462 - 2024732

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

AATTGCCTACTT

Flanking Amino Acid:

PMQKLQDLVNRTPWKKCCFS

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

73.3

36.4

Major BPS

81.8

0.79

1.1

34.5

Major PPT

77.6

0.62

0.9

73.7

35.9

Minor 5ss

30.8

-2.2

3.3

41.8

Minor BPS

45.9

-0.2

2.2

68.13

42.9

Associated Gene:

Gene:

RBBP5

Ensembl Gene ID:

ENSAPLG00000005563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005810

2016651 - 2028246

11596