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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2033745_2034208_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2033745 - 2034208

Intron Length:
464

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGGAAA

5'SS Class:
strong_major

3'SS Sequence:
AATTCTTCTACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTGTAT

U12 Branch Point Sequence:
TTTGTATGAATT

Flanking Amino Acid:
HRDIKLKNVLLDKKNRAKIT

Intron Amino Acid Position:
713

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.7
0.79
0.9
76.6
33.6

Major BPS
71.5
0.53
1.4
71.7
44.6

Major PPT
80.3
0.68
0.8
73.5
36.1

Minor 5ss
31.7
-2.1
3.1
36.4
42

Minor BPS
54.5
0.22
1.8
77.48
39.2

Associated Gene:

Gene:
DSTYK

Ensembl Gene ID:

Chromosome:
27

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2030263 - 2047372
17110

2031413 - 2050055
18643