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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2036862_2038146_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2036862 - 2038146

Intron Length:
1285

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGCACA

5'SS Class:
strong_major

3'SS Sequence:
TTTTTTTAACTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAA

U12 Branch Point Sequence:
TTTTTTTTAACT

Flanking Amino Acid:
TRMLWEQIKQIIQRITWVSP

Intron Amino Acid Position:
476

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.2
0.76
1
73.3
37.4

Major BPS
87.3
0.93
0.8
78
36.5

Major PPT
78.7
0.65
0.9
75.4
38.6

Minor 5ss
45.8
-0.4
2.5
58.4
45.9

Minor BPS
88.9
1.3
0.8
99.22
22

Associated Gene:

Gene:
DSTYK

Ensembl Gene ID:

Chromosome:
27

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2030263 - 2047372
17110

2031413 - 2050055
18643