Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_2038916_2041398_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2038916 - 2041398

Intron Length:

2483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTACT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAAAA

U12 Branch Point Sequence:

GAGTACAAAAGA

Flanking Amino Acid:

LEDAANMEFKDIIIPENGEP

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

1.1

84.4

33.5

Major BPS

60.3

0.26

65.5

Major PPT

0.77

0.8

80.4

31.6

Minor 5ss

43.9

-0.7

2.6

61.4

42.9

Minor BPS

39.4

-0.8

2.1

47.27

42.1

Associated Gene:

Gene:

DSTYK

Ensembl Gene ID:

ENSAPLG00000005300

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033888

2030263 - 2047372

17110

ENSAPLT00000005528

2031413 - 2050055

18643