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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2042063_2046986_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2042063 - 2046986

Intron Length:
4924

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACTGGG

5'SS Class:
major

3'SS Sequence:
TCTTGCTTGTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAC

U12 Branch Point Sequence:
GTTTTTTTACCT

Flanking Amino Acid:
EVMLPYSLLKEVDVVVAPCR

Intron Amino Acid Position:
135

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.7
0.7
1.1
67.1
44.6

Major BPS
86.6
0.91
0.8
77.7
36.7

Major PPT
73
0.52
1
73.3
37.2

Minor 5ss
37.6
-1.4
3.2
49.7
46.6

Minor BPS
68.3
0.65
1.6
83.79
37.4

Associated Gene:

Gene:
DSTYK

Ensembl Gene ID:

Chromosome:
27

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2030263 - 2047372
17110

2031413 - 2050055
18643