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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2087644_2088711_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2087644 - 2088711

Intron Length:

1068

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

CGCCTGTGCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

CTTCCCCTCCCC

Flanking Amino Acid:

NHPHIIAVHEVFENSSKIVI

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

62.1

0.27

56.1

38.8

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

36.4

-1

3.7

60.47

44.7

Associated Gene:

Gene:

NUAK2

Ensembl Gene ID:

ENSAPLG00000020575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031064

2083276 - 2093492

10217