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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2124835_2127835_R

Intron Information:

Intron Rank:

29686

Intron Class:

major

Intron Phase:

Intron Coordinates:

2124835 - 2127835

Intron Length:

3001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCATTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

TTTTTTTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.6

33.2

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

84.7

0.78

0.7

86.7

25.9

Minor 5ss

39.2

-1.2

2.8

51.8

Minor BPS

67.5

0.63

1.7

86.64

33.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025287

2123692 - 2132323

8632

ENSAPLT00000005426

2123692 - 2129259

5568

ENSAPLT00000029276

2123692 - 2131947

8256