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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2129931_2131172_R

Intron Information:

Intron Rank:

29695

Intron Class:

major

Intron Phase:

Intron Coordinates:

2129931 - 2131172

Intron Length:

1242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGTACC

5'SS Class:

major

3'SS Sequence:

TTTTTTCCAAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTAAAT

U12 Branch Point Sequence:

TTTTTTCCAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

1.2

70.9

39.4

Major BPS

0.05

1.3

61.2

Major PPT

73.5

0.53

76.7

Minor 5ss

-2.1

2.7

38.2

39.5

Minor BPS

49.1

-0

1.9

69.25

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029276

2123692 - 2131947

8256