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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2198523_2198838_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2198523 - 2198838

Intron Length:

316

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTTCATCACCT

Flanking Amino Acid:

NNNQRRFSMEDVSKRLSLPM

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.4

1.17

0.7

94.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

78.1

0.63

0.7

72.1

Minor 5ss

-2.9

41.3

45.2

Minor BPS

51.5

0.13

2.1

77.41

44.7

Associated Gene:

Gene:

CDK18

Ensembl Gene ID:

ENSAPLG00000004817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005010

2181040 - 2203698

22659

ENSAPLT00000034932

2186830 - 2203698

16869

ENSAPLT00000022395

2193826 - 2204876

11051

ENSAPLT00000017812

2193826 - 2203698

9873