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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2201209_2201444_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2201209 - 2201444

Intron Length:

236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTCGGTGGG

5'SS Class:

weak_major

3'SS Sequence:

CTCTCGTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

GCTCCCTCATGC

Flanking Amino Acid:

ERGELKLADFGLARAKSVPT

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.2

0.22

1.4

49.7

43.9

Major BPS

0.5

1.1

71.2

35.2

Major PPT

75.2

0.57

0.8

72.4

32.3

Minor 5ss

26.6

-2.7

3.2

31.9

42.5

Minor BPS

44.2

-0.4

52.83

44.3

Associated Gene:

Gene:

CDK18

Ensembl Gene ID:

ENSAPLG00000004817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022395

2193826 - 2204876

11051

ENSAPLT00000017812

2193826 - 2203698

9873

ENSAPLT00000005010

2181040 - 2203698

22659

ENSAPLT00000034932

2186830 - 2203698

16869