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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2217621_2217753_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2217621 - 2217753

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGTG

5'SS Class:

strong_major

3'SS Sequence:

TCACCTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

CGTGCCTCACCT

Flanking Amino Acid:

YQKDSAIFLQALHFFVGFGA

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

72.2

39.5

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

78.9

0.65

0.8

72.9

31.6

Minor 5ss

34.5

-1.8

3.4

45.9

49.3

Minor BPS

49.3

0.03

68.65

47.8

Associated Gene:

Gene:

MFSD4A

Ensembl Gene ID:

ENSAPLG00000004747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017170

2211815 - 2229439

17625

ENSAPLT00000004894

2215913 - 2229439

13527