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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2217994_2222376_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2217994 - 2222376

Intron Length:

4383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCTCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

TCCTCCTCCACA

Flanking Amino Acid:

YAFWIMALINLPVPIAVFFL

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

31.3

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

77.5

0.62

0.7

71.8

26.4

Minor 5ss

32.3

-2

3.3

46.1

42.2

Minor BPS

54.6

0.14

67.11

45.4

Associated Gene:

Gene:

MFSD4A

Ensembl Gene ID:

ENSAPLG00000004747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017170

2211815 - 2229439

17625

ENSAPLT00000004894

2215913 - 2229439

13527