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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2224374_2225403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2224374 - 2225403

Intron Length:

1030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAC

U12 Branch Point Sequence:

TTTTTCCCACAG

Flanking Amino Acid:

LVLFMTDGIVGEYSGFIYSY

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.5

29.5

Major BPS

61.7

0.29

63.7

32.3

Major PPT

82.3

0.73

0.8

76.9

Minor 5ss

35.2

-1.7

2.8

38.4

40.8

Minor BPS

43.4

-0.6

2.2

57.32

43.9

Associated Gene:

Gene:

MFSD4A

Ensembl Gene ID:

ENSAPLG00000004747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017170

2211815 - 2229439

17625

ENSAPLT00000004894

2215913 - 2229439

13527