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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2225578_2227445_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2225578 - 2227445

Intron Length:

1868

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGCTA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAC

U12 Branch Point Sequence:

TTTACTTTCAGG

Flanking Amino Acid:

KPATMVFINVVGVLITFLLL

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

71.4

40.1

Major BPS

66.4

0.41

37.6

Major PPT

0.63

0.9

72.5

37.8

Minor 5ss

34.5

-1.8

3.4

44.3

44.6

Minor BPS

49.4

-0.1

2.1

63.46

44.8

Associated Gene:

Gene:

MFSD4A

Ensembl Gene ID:

ENSAPLG00000004747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004894

2215913 - 2229439

13527

ENSAPLT00000017170

2211815 - 2229439

17625