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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2227594_2228258_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2227594 - 2228258

Intron Length:

665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCGCAC

U12 Branch Point Sequence:

ATCTCTCGCACT

Flanking Amino Acid:

AYTEDILQYKGCATTVLVTG

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

72.7

44.5

Major BPS

49.1

-0

1.3

60.7

37.6

Major PPT

89.6

0.89

0.7

84.7

30.1

Minor 5ss

38.8

-1.3

2.8

48.8

Minor BPS

45.3

-0.2

2.1

67.68

43.2

Associated Gene:

Gene:

MFSD4A

Ensembl Gene ID:

ENSAPLG00000004747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017170

2211815 - 2229439

17625

ENSAPLT00000004894

2215913 - 2229439

13527