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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2241107_2242278_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2241107 - 2242278

Intron Length:

1172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTAA

5'SS Class:

strong_major

3'SS Sequence:

ATGTGTTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

TTTCAAACAACT

Flanking Amino Acid:

ASLTPALFSQTPILLTPSPL

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

80.2

30.6

Major BPS

0.57

1.2

77.7

37.1

Major PPT

79.6

0.67

0.9

73.4

41.3

Minor 5ss

45.1

-0.5

2.6

58.1

46.5

Minor BPS

45.4

-0.2

2.2

73.93

41.6

Associated Gene:

Gene:

ELK4

Ensembl Gene ID:

ENSAPLG00000004738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004878

2239159 - 2245722

6564