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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2253626_2254112_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2253626 - 2254112

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGTGCT

5'SS Class:

major

3'SS Sequence:

CCTTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GTTTTGTTGATG

Flanking Amino Acid:

LGIVCHLRIDRGGMIQTSEQ

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.3

71.9

36.2

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

82.9

0.74

0.7

76.7

25.3

Minor 5ss

29.3

-2.4

3.3

41.8

44.9

Minor BPS

50.3

-0.1

2.1

62.23

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004844

2245472 - 2254206

8735