Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_2293933_2294026_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2293933 - 2294026

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACGAGAG

5'SS Class:

major

3'SS Sequence:

CTGCCCCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTAAC

U12 Branch Point Sequence:

GCAGGGCTAACC

Flanking Amino Acid:

QETFLDTSHLELPNPCAKDS

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

57.1

42.4

Major BPS

51.7

0.04

1.3

55.3

40.3

Major PPT

75.3

0.57

0.8

65.5

36.1

Minor 5ss

28.3

-2.5

3.4

29.2

43.4

Minor BPS

36.6

-1

2.5

44.12

43.6

Associated Gene:

Gene:

ELF3

Ensembl Gene ID:

ENSAPLG00000026589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038079

2291490 - 2295610

4121