Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_2311983_2312226_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2311983 - 2312226

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CGTCCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAT

U12 Branch Point Sequence:

CCCCCCCCCATG

Flanking Amino Acid:

TDELLFTGSKDRSCKMWNLV

Intron Amino Acid Position:

1305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.6

38.4

Major BPS

48.9

-0

1.3

39.1

Major PPT

71.8

0.49

0.8

65.4

30.4

Minor 5ss

25.5

-2.8

3.1

30.6

43.3

Minor BPS

-1.2

33.01

Associated Gene:

Gene:

KIF21B

Ensembl Gene ID:

ENSAPLG00000004318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004503

2308877 - 2324660

15784

ENSAPLT00000043028

2303683 - 2325650

21968

ENSAPLT00000025419

2303683 - 2325650

21968