Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_2315317_2315713_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2315317 - 2315713

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCGTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

CTCCCCTGAGCC

Flanking Amino Acid:

SASQDDFKFKGEPKLSGQMK

Intron Amino Acid Position:

1115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

42.7

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

66.6

0.37

0.9

38.4

Minor 5ss

37.8

-1.4

46.8

48.5

Minor BPS

49.8

-0

1.8

60.78

44.2

Associated Gene:

Gene:

KIF21B

Ensembl Gene ID:

ENSAPLG00000004318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004503

2308877 - 2324660

15784

ENSAPLT00000043028

2303683 - 2325650

21968

ENSAPLT00000025419

2303683 - 2325650

21968