Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_2319975_2320243_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2319975 - 2320243

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAAGAGC

5'SS Class:

major

3'SS Sequence:

CCTCGTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

CCTGGCCTGACT

Flanking Amino Acid:

VDSDSDAEEKAVNFQADLAD

Intron Amino Acid Position:

605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

61.1

43.7

Major BPS

51.1

0.03

1.2

39.9

Major PPT

70.6

0.46

0.8

61.2

35.1

Minor 5ss

31.5

-2.1

3.2

34.2

41.9

Minor BPS

45.3

-0.2

2.2

63.28

47.2

Associated Gene:

Gene:

KIF21B

Ensembl Gene ID:

ENSAPLG00000004318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025419

2303683 - 2325650

21968

ENSAPLT00000004503

2308877 - 2324660

15784

ENSAPLT00000043028

2303683 - 2325650

21968