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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2322867_2323283_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2322867 - 2323283

Intron Length:
417

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTACGGCCC

5'SS Class:
major

3'SS Sequence:
TTTGTGTTGGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCTGAAT

U12 Branch Point Sequence:
TTTGCTTTGTGT

Flanking Amino Acid:
KEGISINCGLLALGNVISAL

Intron Amino Acid Position:
281

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70
0.47
1.1
55.4
40.2

Major BPS
47.7
-0.1
1.6
57.6
45.8

Major PPT
76.3
0.59
1.1
72.9
42.2

Minor 5ss
31.1
-2.2
3.4
39.5
41.3

Minor BPS
41.4
-0.6
3.6
74.14
43.6

Associated Gene:

Gene:
KIF21B

Ensembl Gene ID:

Chromosome:
27

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2303683 - 2325650
21968

2308877 - 2324660
15784

2303683 - 2325650
21968