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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2336962_2337172_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2336962 - 2337172

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCGAT

U12 Branch Point Sequence:

CCCCCCCGATGT

Flanking Amino Acid:

TPAAPRPPAQGCDLPFPSER

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

47.5

-0.1

1.3

43.7

39.4

Major PPT

75.6

0.58

0.7

68.7

31.7

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

36.4

-0.9

46.43

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025281

2336358 - 2341695

5338