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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2337238_2337900_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2337238 - 2337900

Intron Length:

663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CTGCCCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

CCCTGCTCAGCT

Flanking Amino Acid:

TNTNNSNWPEGLQYEDEVLR

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.1

37.9

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

65.5

0.35

57.8

38.5

Minor 5ss

31.4

-2.1

3.6

39.6

45.9

Minor BPS

44.5

-0.3

2.2

59.42

49.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033604

2336955 - 2342827

5873

ENSAPLT00000025281

2336358 - 2341695

5338