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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2338092_2338639_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2338092 - 2338639

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCACA

5'SS Class:

major

3'SS Sequence:

CCGTTGGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CCTCCCCTGACG

Flanking Amino Acid:

EAAMEEGIYRRTGGLFGQVD

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

67.6

39.4

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

71.3

0.48

64.3

41.5

Minor 5ss

33.8

-1.8

2.8

32.8

41.8

Minor BPS

50.7

-0.1

1.8

56.96

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025281

2336358 - 2341695

5338

ENSAPLT00000033604

2336955 - 2342827

5873