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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2339321_2339420_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2339321 - 2339420

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCCCAC

5'SS Class:

weak_major

3'SS Sequence:

TCCTCCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAG

U12 Branch Point Sequence:

GTGCCATCAGGT

Flanking Amino Acid:

LLDQVIPPIGDDEVTVGKFY

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.2

55.9

43.4

Major BPS

59.4

0.23

1.5

69.4

37.7

Major PPT

84.3

0.77

0.7

76.2

32.4

Minor 5ss

49.8

-0

2.5

67.7

43.5

Minor BPS

-0.6

2.1

56.09

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033604

2336955 - 2342827

5873

ENSAPLT00000025281

2336358 - 2341695

5338