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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2339523_2340418_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2339523 - 2340418

Intron Length:

896

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGGGT

5'SS Class:

major

3'SS Sequence:

GCTTTTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGGGAA

U12 Branch Point Sequence:

CTTTTCTCACAG

Flanking Amino Acid:

VRTALKIKTEGNFEQANEEL

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

61.3

43.5

Major BPS

48.8

-0

1.5

49.1

46.3

Major PPT

81.5

0.71

0.8

75.8

32.8

Minor 5ss

29.2

-2.4

3.8

46.9

48.5

Minor BPS

-0.3

56.14

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033604

2336955 - 2342827

5873

ENSAPLT00000025281

2336358 - 2341695

5338