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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2352661_2353202_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2352661 - 2353202

Intron Length:

542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGCTCC

5'SS Class:

major

3'SS Sequence:

CTCTCCTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAG

U12 Branch Point Sequence:

GGTGGCAGACTT

Flanking Amino Acid:

MEGWTEVLYWVNDAIGNEWP

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

57.6

42.8

Major BPS

44.5

-0.3

1.6

55.8

41.7

Major PPT

74.6

0.55

0.9

68.5

37.3

Minor 5ss

43.3

-0.7

3.1

51.1

45.7

Minor BPS

36.1

-0.9

2.1

51.07

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002736

2346577 - 2362965

16389