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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2353842_2354215_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2353842 - 2354215

Intron Length:

374

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

CTCCCCGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

AGTGGCTGAGCT

Flanking Amino Acid:

RPLRLVSGVPSLQVVLNSII

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.26

1.1

56.6

36.4

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

71.9

0.49

0.9

64.9

30.7

Minor 5ss

28.4

-2.5

3.3

31.4

36.5

Minor BPS

44.8

-0.3

2.1

64.16

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002736

2346577 - 2362965

16389