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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2367663_2368028_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2367663 - 2368028

Intron Length:
366

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTGAGTATA

5'SS Class:
major

3'SS Sequence:
CCTCATCCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTGAT

U12 Branch Point Sequence:
CTCTCCTCATCC

Flanking Amino Acid:
KGFVGKTVADWVCLVQHQSN

Intron Amino Acid Position:
33

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.5
0.55
1.1
76.5
34

Major BPS
84
0.85
0.9
75
39.9

Major PPT
76.1
0.59
0.8
69.2
31

Minor 5ss
36.8
-1.5
2.9
52.2
44.4

Minor BPS
55.2
0.14
1.9
66.27
45.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
27

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2365617 - 2379535
13919