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Intron Name: Anas_platyrhynchos_platyrhynchos_27_2368122_2379531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2368122 - 2379531

Intron Length:

11410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTGACTCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

TTGGCCTGACTC

Flanking Amino Acid:

MGTQGRIIPRC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

67.1

44.6

Major BPS

51.1

0.03

1.2

39.9

Major PPT

65.3

0.35

1.1

57.8

Minor 5ss

31.6

-2.1

3.1

31.9

42.5

Minor BPS

49.5

-0

1.9

62.64

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034635

2365617 - 2379535

13919